[<ts>] [INFO] [DEBUG] Initializing checkpoints...
[<ts>] [INFO] Fresh run <id> - branch will be created on first checkpoint
[<ts>] [DEBUG] Built execution thread: 0 codons across 1 runs, next codon: write-line
[<ts>] [INFO] Added checkpoint patterns: out.txt
[<ts>] [INFO] [CHECKPOINT-DEBUG] Creating checkpoint for codon write-line with status completed
[<ts>] [INFO] [CHECKPOINT-DEBUG] Created checkpoint: <sha> (completed) on branch run-<id>
[<ts>] [DEBUG] Built execution thread: 1 codons across 1 runs, next codon: write-second
[<ts>] [DEBUG] Built execution thread: 1 codons across 1 runs, next codon: write-second
[<ts>] [INFO] Added checkpoint patterns: out.txt, second.txt
[<ts>] [INFO] Shutting down server: SIGTERM
[<ts>] [INFO] [CHECKPOINT-DEBUG] Creating checkpoint for codon write-second with status exit
[<ts>] [INFO] [CHECKPOINT-DEBUG] Created checkpoint: <sha> (exit) on branch run-<id>
[<ts>] [INFO] Shutting down sentinel manager...
[<ts>] [INFO] Shutdown: SIGTERM (exit code: 0)
[<ts>] [INFO] [DEBUG] Initializing checkpoints...
[<ts>] [DEBUG] Built execution thread: 2 codons across 1 runs, next codon: none
[<ts>] [DEBUG] Built execution thread: 2 codons across 1 runs, next codon: none
[<ts>] [INFO] Rolling back to completed checkpoint of codon write-line (run <id>): {"codon":{"codonId":"write-line","startTime":"<ts>","status":"completed","claudePid":"<pid>","claudeLogPath":".hankweave/runs/<id>/write-line-claude.log","claudeSessionId":"<session>","currentCost":0.01039995,"currentTokens":{"inputTokens":"<n>","outputTokens":"<n>","cacheCreationTokens":"<n>","cacheReadTokens":"<n>"},"assistantMessageCount":3,"extensionCount":0,"endTime":"<ts>","exitCode":0,"finalCost":"<n>","finalTokens":{"inputTokens":"<n>","outputTokens":"<n>","cacheCreationTokens":"<n>","cacheReadTokens":"<n>"},"resultMessageReceived":true,"completionCheckpoint":"<sha>"},"runId":"<id>","runStatus":"failed","runStartTime":"<ts>","runEndTime":"<ts>","gitBranch":"run-<id>","globalIndex":1,"runIndex":0,"codonIndexInRun":0,"validatedCheckpoints":[{"type":"completed","sha":"<sha>","message":"completed:write-line [run:<id>] Write one line","timestamp":"<ts>","branch":"run-<id>"}],"continuationSessionId":null}
[<ts>] [INFO] Starting codon-by-codon rollback to completed checkpoint <sha> in codon write-line (Write one line)
[<ts>] [INFO] Checked out checkpoint <sha7> (detached HEAD)
[<ts>] [DEBUG] Built execution thread: 1 codons across 2 runs, next codon: write-second
[<ts>] [DEBUG] Built execution thread: 1 codons across 2 runs, next codon: write-second
[<ts>] [DEBUG] [getNextCodonToExecute] Execution thread determined next codon: write-second
[<ts>] [INFO] Added checkpoint patterns: out.txt, second.txt
[<ts>] [DEBUG] Built execution thread: 2 codons across 2 runs, next codon: none
[<ts>] [INFO] [CHECKPOINT-DEBUG] Creating checkpoint for codon write-second with status completed
[<ts>] [INFO] [CHECKPOINT-DEBUG] Created checkpoint: <sha> (completed) on branch run-<id>
[<ts>] [DEBUG] Built execution thread: 2 codons across 2 runs, next codon: none
[<ts>] [DEBUG] Built execution thread: 2 codons across 2 runs, next codon: none
[<ts>] [INFO] Shutting down server: all codons completed
[<ts>] [INFO] Shutting down sentinel manager...
[<ts>] [INFO] Shutdown: all codons completed (exit code: 0)
